Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGR----GGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLK--QYLALYTNGM-----NDVVARTAPAPQGPWSAEQM-LVSSWQMPGGIYAPMMHPW----STGKDVYFNLSLWSAYNVMLMHTVLP |
| 3QZ4 Chain:A ((26-162)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKRYYIYPTSDGFPGWGGSYFKVFSS--K---NLKTWKEETV---ILEMGKN---VSWANGNAWAPCIEEKKIDGKYKYFFYYSANPTTNKGKQIGVAVADSPTGPFTDLGKPIITSSPT---GRGQQIDVDVFTDPVSGKSYLYWGNGYM----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38200 for 818 contacts (-46.7/contact) +
2D Compatibility (PS) -12951 + (NN) -10731 + (LL) 14448
1D Compatibility (HY) 400 + (ID) 750
Total energy: -47784.0 ( -58.42 by residue)
QMean score : 0.271
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