Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLR--DAGPVV---FMNGWYYLTRREDVLAALRNPKVFSSRKALQP--PGNPLPVVPLAFDPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGECEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMS-DRPHPTEADVAAARE-LLEYLTAMVAERRRNPGPDVLSQ---VQIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAPRVTTEPVTVGGMTLPAGSPVRLCMAAV---NRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALKNLPLRWS |
| 4C9N Chain:B ((43-415)) | ------------------------------AWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLGGLNTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSD-MEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVD---LSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLK-DRAVPIYHSGIVAAVENIPLEWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224908 for 2938 contacts (-76.6/contact) +
2D Compatibility (PS) -39339 + (NN) -23553 + (LL) 1588
1D Compatibility (HY) -24400 + (ID) 6200
Total energy: -316812.0 ( -107.83 by residue)
QMean score : 0.541
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