Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT--TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP-----MQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW
3TZQ Chain:H ((8-254))
----ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIF-----------ATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLLAHL-
General information:
TITO was launched using:
RESULT:
Template:
3TZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171252 for 2116 contacts (-80.9/contact) +
2D Compatibility (PS) -25996 + (NN) -5368 + (LL) 104
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -224062.0 ( -105.89 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_3TZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZQ-query.scw
PDB file :
Tito_Scwrl_3TZQ.pdb
: