Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQG--QPIITALPHPTGSHARLPFVGIAEAYV----LNAFRRAGV--------PMQRIRPSLDWLIKNV---GPHALASQDLCTDGAEVLWRFAER--SGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQI-----SFADDNLASMIRLPQY---------GDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA-- |
| 1KEZ Chain:A ((15-281)) | -SSALRDGYRQAGVSGRVRSYLDLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRTQGDKPFVVAGH---SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAGEPMGPWPDDSWKPTWPFEHDTVAVPGDHFTMVQEH---ADAIARHIDAWLGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88386 for 1782 contacts (-49.6/contact) +
2D Compatibility (PS) -24592 + (NN) -6004 + (LL) 436
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -123846.0 ( -69.50 by residue)
QMean score : 0.274
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