Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL--ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P----------PGSTVRHLLAHTSGLAMHSD----------------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGGP---------------------------AAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNSTRTFGHFGQ---SGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 4GDN Chain:A ((19-329)) | --IEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFTGLAILKLAQEGRLNLNDDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDAVTNKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNYDLLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSFKQTNNKSKHDAIGYELQGSTPVVSKPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPPDKYKSLVQQSHKNLSSTI-------GEPNANAYASGWFTNN-----------DEHLVFHSGTLDNFSSFILLNPKQNYGIVVLANLNSEY------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121929 for 1898 contacts (-64.2/contact) +
2D Compatibility (PS) -24579 + (NN) -6974 + (LL) 1928
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -162154.0 ( -85.43 by residue)
QMean score : 0.352
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