Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAAGVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRRCSE-HHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCRS
3MWM Chain:A ((10-135))
-----GRATRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAEGESVYRRCSTGDHHHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAG
General information:
TITO was launched using:
RESULT:
Template:
3MWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44656 for 821 contacts (-54.4/contact) +
2D Compatibility (PS) -14069 + (NN) -7345 + (LL) 296
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -81574.0 ( -99.36 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3MWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MWM-query.scw
PDB file :
Tito_Scwrl_3MWM.pdb
: