Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGK-PIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTID-WAVNDGLGSYFWQHNWGSPKGYTHPAAH------LHQVEIDKRKVG-GVGVDVNQILKPQFGQWA-------- |
| 4FF5 Chain:A ((38-266)) | ------NIAQIEAQALKHLDKPIIDLSGWQRPEE-------INYDALSQNIS-----GAIVRVHSGTTKENDASFINGIDKAYKSHITELQKRNVP-VAVYAYVAGKS----------VQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASL-GAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGFDHDLDINVISPLKNKEETFRKLFLKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22728 for 1635 contacts (-13.9/contact) +
2D Compatibility (PS) -22688 + (NN) -10653 + (LL) 1984
1D Compatibility (HY) -6800 + (ID) 1900
Total energy: -62785.0 ( -38.40 by residue)
QMean score : 0.285
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