Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNA---GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA-GLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
2RC3 Chain:A ((6-131))
-KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDF-SRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAIS------------------
General information:
TITO was launched using:
RESULT:
Template:
2RC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75835 for 875 contacts (-86.7/contact) +
2D Compatibility (PS) -13679 + (NN) -7721 + (LL) 2296
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -105589.0 ( -120.67 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_2RC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RC3-query.scw
PDB file :
Tito_Scwrl_2RC3.pdb
: