Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTALNRAVASARVGTEVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQATVWDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENL-------RFFASLYAGATADPMQLLAAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNAR-----KIKDIIVDLKARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELKIARSRRRVRVEYRGDGGGLETAEFGMDGLADDPAFHSVLRNHHVETIHSREASLDDVFVEVTGRQLT
2YYZ Chain:A ((4-221))-----------------IRVVNLKKYFGKVK--AVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYRE-VGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPT---QLSGGQQQRVALARALVKQPKVLLFDEPLSNLD-ANLRMIMRAEIKHLQQEL---GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119646 for 1580 contacts (-75.7/contact) +
2D Compatibility (PS) -22033 + (NN) -7472 + (LL) 6240
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -160161.0 ( -101.37 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_2YYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YYZ-query.scw
PDB file : Tito_Scwrl_2YYZ.pdb: