Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTALNRAVASARVGTEVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQATVWDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENL-------RFFASLYAGATADPMQLLAAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNAR-----KIKDIIVDLKARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELKIARSRRRVRVEYRGDGGGLETAEFGMDGLADDPAFHSVLRNHHVETIHSREASLDDVFVEVTGRQLT |
2YYZ Chain:A ((4-221)) | -----------------IRVVNLKKYFGKVK--AVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYRE-VGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPT---QLSGGQQQRVALARALVKQPKVLLFDEPLSNLD-ANLRMIMRAEIKHLQQEL---GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119646 for 1580 contacts (-75.7/contact) +
2D Compatibility (PS) -22033 + (NN) -7472 + (LL) 6240
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -160161.0 ( -101.37 by residue)
QMean score : 0.518
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