Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRG-AELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGP-VTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
5A89 Chain:A ((4-138)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72558 for 984 contacts (-73.7/contact) +
2D Compatibility (PS) -14282 + (NN) -4727 + (LL) 14816
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -92601.0 ( -94.11 by residue)
QMean score : 0.505
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