Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XZW Chain:F ((1-112))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERY-----TVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI
General information:
TITO was launched using:
RESULT:
Template:
2XZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63771 for 697 contacts (-91.5/contact) +
2D Compatibility (PS) -11899 + (NN) -3761 + (LL) 268
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -95163.0 ( -136.53 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2XZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZW-query.scw
PDB file :
Tito_Scwrl_2XZW.pdb
: