Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGLAKTVR--LAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVA----DGEDQQTFA-EFFDRR---LALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
| 1WMB Chain:B ((2-236)) | ---LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE--TAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95749 for 1860 contacts (-51.5/contact) +
2D Compatibility (PS) -24215 + (NN) -8534 + (LL) 4508
1D Compatibility (HY) -10000 + (ID) 3900
Total energy: -137890.0 ( -74.13 by residue)
QMean score : 0.443
|
|
|