Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGHVAEVNGGVAAMALWFLNFSTWDGVAGIYVEDLFVWPRFRRRGLARGLLSTLARECVDNRYTRLAWSVLNWNSDAIALYDRIGGQPQHEWTIYRLSGPRLAALAAPR
4QVT Chain:D ((47-122))
----VAEVNGDVVGTVM-----GGYDGHRGSAYY-LGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLG------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QVT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61780 for 444 contacts (-139.1/contact) +
2D Compatibility (PS) -7953 + (NN) -1277 + (LL) 2124
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -76186.0 ( -171.59 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4QVT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QVT-query.scw
PDB file :
Tito_Scwrl_4QVT.pdb
: