Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRDAPCEPVPIRTPLA-ETVGSRLT--KPPLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPVP-------YLDSLPDDLTDV-PVMVLDPMVATGGSMTHTLGLLISRGAADITVLCVVAAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR
1XTU Chain:G ((2-216))
-PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG--
General information:
TITO was launched using:
RESULT:
Template:
1XTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159918 for 1630 contacts (-98.1/contact) +
2D Compatibility (PS) -21545 + (NN) -3086 + (LL) 168
1D Compatibility (HY) -19600 + (ID) 3700
Total energy: -207681.0 ( -127.41 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1XTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTU-query.scw
PDB file :
Tito_Scwrl_1XTU.pdb
: