Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAIMLDGKATRDEIFGDLKQRVAALDA--AGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGT--PAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--RDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTD-------DGLVGDVHPD-VWELAGHVSPNPGGVGPLTRAFLLTNVVELAERR |
| 4A26 Chain:A ((5-296)) | -SAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMK--ENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187817 for 2398 contacts (-78.3/contact) +
2D Compatibility (PS) -29836 + (NN) -9748 + (LL) 280
1D Compatibility (HY) -23600 + (ID) 6450
Total energy: -257171.0 ( -107.24 by residue)
QMean score : 0.475
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