Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDL---GCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA |
| 1W1W Chain:A ((330-411)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMEYLSGGEKTVAALALLFAINSY-----QPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMF-E-----KSDALVGVYRQQQENSSKIITLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40525 for 455 contacts (-89.1/contact) +
2D Compatibility (PS) -9101 + (NN) -8769 + (LL) 19736
1D Compatibility (HY) -7200 + (ID) 600
Total energy: -46459.0 ( -102.11 by residue)
QMean score : 0.459
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