Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYAELSLAT--KMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAAASGINGVAWDAVELPSQFMENWCWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHGDGRSVLQVLEGIRDEVAVMRPPAYNR--FANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA--------- |
| 3AHN Chain:A ((1-564)) | -------MKFSEFRYERPNIEKLKASFQQALQSFQKA--------SNAEEQNEAMKEINQLRNDFSTMAQICYIRHTIDTNDEFYKQEQDFFDEVEPIVKGL-----VNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKT-------YSPDIVEDLQLENKLTSEYTKLVASAKIFFEGEERTLAQLQPFVES---------------------------------PDRDMRKRASEARFTFFQEH-----EEKFDEIYDQLVKVRTAIAQKLGFKNFVELGYARLGRTDYNAEMVAKFRKQVEKHIVPIAVKLRERQRERI---GVEKLKYYDEAF----------VFPTGNPMPKGDANWIIENGKKMYEELS-------------PETGEFFRYMIEHE-----LMDLVAKKGKASGGYCTYIENYK----------APFIFSNFTG---------TSGDIDVLTHEAGHAFQVYESR--HYEIPEYNWPTLEACEIHSMSMEFFTWPWMKLFF-------KEDAEKYQFYHLSDALLFLPYGVAVDEFQHFVYENPNATPAERKQAWRAIERKYMPTKDYDGNDYLERGGFWQRQSHIYTTAFY--YIDYTLAQICAFQFWKRSRE----NYKEAWNDYLTLCRQGGSKPFTELVRVANLISPFEDGCVQSVVGGIEGWLNSVDDQSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144323 for 4732 contacts (-30.5/contact) +
2D Compatibility (PS) -58427 + (NN) -20394 + (LL) 9272
1D Compatibility (HY) -17200 + (ID) 4600
Total energy: -235672.0 ( -49.80 by residue)
QMean score : 0.392
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