Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAA-HYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRRE-GFGLDCSRFAVPGAQMALF |
| 1KNY Chain:A ((1-253)) | MNGPIIM-----TREERMKIVHEIKERILDKYGDDVKAIGVYG---SLGR--------------QTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFYSEEILLDYASQ-----------------------------VESDWPLTHGQFFSILPIYDSGG----YLEKVYQTAKSV------EAQTFHDAICALIVEELFEYAGKWRNIRVQG-----------------PTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMS----------------GQLSDSEKLLESLENFWNGIQEWTERHGYIVDVSK-RIPF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79852 for 1930 contacts (-41.4/contact) +
2D Compatibility (PS) -27509 + (NN) -16677 + (LL) 5700
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -130788.0 ( -67.77 by residue)
QMean score : 0.300
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