Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGY--YMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYA--KSAQSCYQSQFKALLDGRKNKS----INEAEGRKRLAEIVSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVG----VPRAEVTKVAEAEN-----------------------RASTTKGGSKPKTGSNPKV---PKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA--- |
| 1L5A Chain:A ((1-424)) | MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPIDYQDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEPDAPWLWLPFMNRWGSVAANVPGLM-VNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILPFESPHFADCQTELKVLASGSAEGINFTFRGSPQHELCLDITADLASYPQSHWQSHCERFPRFFEQLLARFQQVEQDVARLLAEPAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35107 for 1947 contacts (18.0/contact) +
2D Compatibility (PS) -31360 + (NN) 959 + (LL) 104
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -1540.0 ( -0.79 by residue)
QMean score : 0.103
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