Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVG-LSAPASCAAIRCALDNFQETRFIDQGGEWLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRCAGLDESFLRDLEGELGRRFHP-SSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLH-EE-APQLLCIGLGFG--VEK-----A---------T--VESE-DLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAAALLSYRRVRAA |
| 1MZJ Chain:A ((9-335)) | -RRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIE-----T-------RTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNF------VHTPPLSVAIAHELGAD--NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVIDL-----------ADRSLSFLFGDGAGAAVVGPSDVPGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLV-----DRLGVPE-HVVVSRDAEDTGNTSSASVALALDRLVRSGA--VPGGGPALMIGFGAGLSYAGQALLLPDPPS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144560 for 2838 contacts (-50.9/contact) +
2D Compatibility (PS) -32625 + (NN) -12873 + (LL) 3032
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: -191776.0 ( -67.57 by residue)
QMean score : 0.386
|
|
|