Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPI-------FSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWE-IVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPD---GDDAIGGRGNMRGVACIDG--VAYACGM--DRQVY-RRFDENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRNDHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVYTLVGGHLKEVDFGDEQPQRCFHL-SAADGVLWSIAAKDIFSF--DGQQWTRID----------------------- |
| 2W18 Chain:A ((24-356)) | NLQLVSELKNPSGSCSVDVSAMFWEKEPCIITACED----------VVSLWKA---------LDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE--ETILTFAEVQGMQE-ALLGTTIMNNIVIWNLK--------TGQLLKKMHIDDAS------VCHKAYSEMGLLFIVLSP------VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W18.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115499 for 1950 contacts (-59.2/contact) +
2D Compatibility (PS) -28254 + (NN) -7413 + (LL) 1668
1D Compatibility (HY) -16800 + (ID) 2050
Total energy: -168348.0 ( -86.33 by residue)
QMean score : 0.282
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