Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHG--ASIAWRPMLLGGVFKATGNHSPIEVPAKGRYTLHDLARYAKRYGVPLAFNPA----FPINTLTLMRGAQGYLGGEGFQPYLKAVFEALWVRQQNLGKPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRRGVFGAPSFFV--GDQLF---FGQDRLDFVAEVLAG
3KZQ Chain:A ((1-199))
MNIKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVGGLAPDTN---L-P--MPPEMQQKLEGIWKQIETQLGTKFNYDFWKLCTPVRSTYQSCRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRE
General information:
TITO was launched using:
RESULT:
Template:
3KZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103305 for 1413 contacts (-73.1/contact) +
2D Compatibility (PS) -20169 + (NN) -5266 + (LL) 132
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -133708.0 ( -94.63 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3KZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZQ-query.scw
PDB file :
Tito_Scwrl_3KZQ.pdb
: