Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRSAISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQHLRGELNIGIINNLVTLPQMRITHALSALKGQGPQVRINIGMTTPNEIELGVLDGHLHVGVVPLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRL----PAE---A-QARHQELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFHYAIALTIVTRKGRRPNLVLERFLEAVAVS |
1IXC Chain:A ((1-290)) | --------------MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIY---RSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGK--TCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWP--DIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30195 for 2073 contacts (-14.6/contact) +
2D Compatibility (PS) -27503 + (NN) 9968 + (LL) 432
1D Compatibility (HY) 19600 + (ID) 800
Total energy: -28498.0 ( -13.75 by residue)
QMean score : 0.036
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