Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLAQN-PPAVRTVLAGLMLSIFLS-ALDQTIVAVSLPAISADYADLDLLAWVISAYMVAMTVSMPIYGKLGDLYGRRRLMLFAIVVFTAASLLCGLAQSMGQLVLARVLQGIGAGGLMAVSQAIIGDIVPPRERGRYQGYFSSMYAIASVAGP----VLG---GLLTEYLSWHWVFWINLPIGLLALAISRRTLVGLPVPRRQPVIDYLGIVLMVVGLTALLL-AITQIGQG-AAWSDPALLGLFALAA-LALLLFVAQERRFREPLVPMQLFAVRAATLSWLVAFFASFQAISLTVLVPLRY-QSVT-GAGADSAALHLLPLVMGLPLGAYCCGRLTASLGRYKPLILLGAVLLPCGIAGLALVPVGDHWLSGLCMLLTGI-AIG-TQF-PTSLVAAQNAVEQRHIGVATS-NATLFRSLGGAVGVALMSAILLA---LLKHLRIGGGLDQGFSESALLSSLDAASGPARVILQHVLADAFKVLFLVNAAVALLGLAVASALPDMTLRGRGATQPTAGE |
| 4C8H Chain:A ((25-476)) | ----FRYMPFSPAGTPFGFTDRRYLTMNEVGYVSTVKNSE------------------QYSITVSFFDVGRFRE-YHFEDLFGYDLCFLNEKGTLFG--QSKTGQIQYRPHDSIHSN---------WTKIIPLQAGER----------ITSVAATPVRVIVGTSLGYFRSFNQFGVPFAVEKTSPIVALTAQNYRVFSVHYSQFHGLSYSLSELKRYYKRECPLPMSLPNINSDMKKDAN---LDYYNFNPMGIKSLFFSS---YGDPCIFGS-----DNTLLLLSKWRSPEESKWLPILDS--NMEIWKMSGGKETTDIHVWPLALA-----------------YDTLNCILVK--------------GKHIWPEFPLPLPSEMEIRMPVFVKSKLLEENKAILNKEIQIPVSMAAEEEYLRSKVLSELLTDTLENDGEMYGNENEVLAALNGAYDK-ALLRLFASACSDQNVEKALSLAHELKQDRALTAAVKISERAELPSLVKKINNIREARYEQQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -352439 for 3144 contacts (-112.1/contact) +
2D Compatibility (PS) -41499 + (NN) 10969 + (LL) 7360
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -394459.0 ( -125.46 by residue)
QMean score : 0.158
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