Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSY--NGDLAKLKRMVEISHVSWDVVEVEA-PELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAG--SPQGWADFWDVKKFP---GKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMV-WS----GGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 3WAE Chain:A ((22-320)) | ----------------------PTLTIYSGRG---QSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEE-GSR-SPADLFWANTAGALGQASAKGLLRPLGETLLEKPIAFVP--ASRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWT-PTYSSFQDMVAGMI-------ALY-GEEKTREWLLAMKALAPK--AYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVAL--DPNLLP-LE---EALAKSPKLDLEKLPLDRALRLLRETGVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83671 for 2372 contacts (-35.3/contact) +
2D Compatibility (PS) -31117 + (NN) -11425 + (LL) 4000
1D Compatibility (HY) -8400 + (ID) 2750
Total energy: -133363.0 ( -56.22 by residue)
QMean score : 0.380
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