Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MSI-TSTDICQAADALKGFVGFNRKTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLGREQLQILLEQNINERL-NIGEP-LLVYLRRQD-L-PEITAQRQLR
3O7V Chain:X ((2-118))
ETVLDFMFNFYHQTEEHKFQEQVSKELIGLVVLTKYNNKTYRVDDIDWDQNPKSTFKKAD-------GSEVSFLEYYRKQYNQEITDLKQPMLVSQPKGPAMLIPELCYLTGLT
General information:
TITO was launched using:
RESULT:
Template:
3O7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12376 for 597 contacts (-20.7/contact) +
2D Compatibility (PS) -10199 + (NN) -1822 + (LL) 640
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -27207.0 ( -45.57 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_3O7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7V-query.scw
PDB file :
Tito_Scwrl_3O7V.pdb
: