Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADGIRFWVPVNGSHTRNSEFPRSELRETLSSGRPYNWRYARADNWLEATLRI--EAVPSTRRMIIGQIHSDGSNSGQAAPLVKLLYQLRLDQGRVQALVR-----ERPDDGGTRAYTLMDGIPLGQPFSYRIGVS----RSGLLSVSVNGSALEQQLDPQWAY---QGLYFKAGLYLQDNRGPSSEGGRATFSELRVSHQ-------------- |
| 2ZZJ Chain:A ((1-238)) | TRSFYNDGHLNGWDYVRKENQGTVSEVSNVVFKGTSALKMTQTYT------------PGYTGRYHSEVDHNRGYQRG-------EEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAGCGGDDWMPSTMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEYNVATTVDDDSVFQFRVGLYANSWHDDGHMTGTQGFRQVWYDEVAVGTTFADVDPDQA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28024 for 1555 contacts (-18.0/contact) +
2D Compatibility (PS) -21145 + (NN) -3984 + (LL) 1032
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -59871.0 ( -38.50 by residue)
QMean score : 0.270
|
|
|