Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSHSPIATVAQALRRAERILVITGAGLSADSGMPTYRGLGGLYNGRTEEGLPIEAALSGPMLRRDPALCWKYLAELGKACLAARPNAGHEAIAE----LQKHKPECWVLTQNIDGFHRQAGSPAERLIEIHGELAPLYCQSCGA-------------------ESGGLEEHLHGQLPPRC--AACGGVLRPPVVLFEEMLPEEAIDTLYRELRKGFDAVLVVGTTA-SFP-YIVEPVLRTRQAGGFTAEVNPGVTDLSERVDVKMTGRALDIMPQVVSHIYR |
4UUA Chain:B ((11-271)) | ----SDLTAFREHFAKAKHIAIITGAGVSAESGVPTFRGPGGFWRKWQAQDLATPEAFS-----RDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGS--KHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKC-DLCLVVGTSSIVYPAAMFAPQVASR--GVPVAEFNMECTPATQRFKYHFEGPCGSTLPPALE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96211 for 1807 contacts (-53.2/contact) +
2D Compatibility (PS) -25702 + (NN) -12862 + (LL) 1196
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -155979.0 ( -86.32 by residue)
QMean score : 0.426
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