Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAI-RDWLAGDSRADALDALMARFAEDFSMVTPHG--VVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAGRSERLSTVVLHRDDE-GRLYWRHLQETFCG
3KE7 Chain:A ((13-128))
---------ENIPEMIISLEKEALAS-TDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQ-LPPADHFDMIRPVVQ-VAQNIAVLTFNLDSYLSDKVIKWNCTEVYRRN-PDNQ--WKIIQTHWSY
General information:
TITO was launched using:
RESULT:
Template:
3KE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25794 for 755 contacts (-34.2/contact) +
2D Compatibility (PS) -11897 + (NN) -4257 + (LL) 1368
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -43630.0 ( -57.79 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_3KE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KE7-query.scw
PDB file :
Tito_Scwrl_3KE7.pdb
: