Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALARSGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWAQSRDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADT-PILRANGLEVKTSQNYESLFRMLDAGRFEVFPREVVVI-DGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIR----QGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYL-PGKTPFQREALWYRP |
| 4LXU Chain:A ((1-273)) | GHMIKICIA---------GKNNIAVNSLQFILKNYFEADQIVVIP-NKNDKGIDSWQKSLLKFALDNNIKIVTLDEIYNI--EQIIFFSLEFDQI---IKIENFKSDRLFNIHFSALPKYKGVFTSITPIL----NNELESGVTLHRI--------DNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINSSYFSRKDINLVHKINF--KKTSFEIHNQIRAFIFQEYQLPIINN------SKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51600 for 2048 contacts (-25.2/contact) +
2D Compatibility (PS) -26900 + (NN) -971 + (LL) 2336
1D Compatibility (HY) -13200 + (ID) 2200
Total energy: -92535.0 ( -45.18 by residue)
QMean score : ?
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