Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSQINRQYQLAQRPSGLPGRDTFSF--VETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV
4HFN Chain:B ((7-340))-----NKQVILKNYV-GYPKESDMEIKNVTIKLKVPGSNDVVVKNLYLSCDPYMRSRMRK-----ESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITP--LFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQ-------EGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMV


General information:
TITO was launched using:
RESULT:

Template: 4HFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182172 for 2727 contacts (-66.8/contact) +
2D Compatibility (PS) -34256 + (NN) -18926 + (LL) 1368
1D Compatibility (HY) -32400 + (ID) 6950
Total energy: -273336.0 ( -100.23 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_4HFN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HFN-query.scw
PDB file : Tito_Scwrl_4HFN.pdb: