Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAGRRLAGLENGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGR-----QQQTFLLQLLGAVEHAPGGEYLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES
1NG6 Chain:A ((92-147))
--------------------------------------------------------------------PEQLSEEELRTIVNETIAEVGASSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1NG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19746 for 317 contacts (-62.3/contact) +
2D Compatibility (PS) -5852 + (NN) -6050 + (LL) 5252
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -30296.0 ( -95.57 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_1NG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NG6-query.scw
PDB file :
Tito_Scwrl_1NG6.pdb
: