Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQMMQMYQQVGPAQFSAMIGQFAPYFASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKAT-G-DVRAVADGSQIDWQAT-GNLVVPVVAYVD--DKPVFRAEITMYVSQA
2QWZ Chain:A ((24-157))
----------FDKDGLSAYLEEVFPQIQG-EFSIDALAKGEITMRLNVQERHLRPGGTVSGPSMFALADVSVYALVLAHLGREALAVTTNASLDFMRKPESGRDLLGQARLL----KLGRTLAVGDILLFSEGMEAPVARSTMTYSIPP-
General information:
TITO was launched using:
RESULT:
Template:
2QWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80397 for 963 contacts (-83.5/contact) +
2D Compatibility (PS) -14057 + (NN) -3888 + (LL) 2128
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -103614.0 ( -107.60 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_2QWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QWZ-query.scw
PDB file :
Tito_Scwrl_2QWZ.pdb
: