Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVT-------LEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKRVVARQR
2AAL Chain:A ((1-119))
-PLLKFDLFYGRTD-AQIKSLLDAAHGAMVDAFGVPANDRYQTVSQHRPGEMVLEDTGLGY-GRSSAVVLLTV-ISRPRSEEQKVCFYKLLTGALERDCGI---SPDDVIVALVENSDADWSFGRGRAEF
General information:
TITO was launched using:
RESULT:
Template:
2AAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54275 for 757 contacts (-71.7/contact) +
2D Compatibility (PS) -12262 + (NN) -2027 + (LL) 188
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -71726.0 ( -94.75 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_2AAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AAL-query.scw
PDB file :
Tito_Scwrl_2AAL.pdb
: