Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPG-----MHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEG---AEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHY---------------------SSRSAAPIVE--------------RHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQ--------------RGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD |
| 1Y0Z Chain:A ((4-330)) | LLLVETPIPQQKHY------ESKPFPAVISPPPALSLPLFTQTIKTQKHYLDSLLHESGAVLFRGFP-VNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQVREFPSKLFFYCEIEP--KCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRVLGEDDDPSSPIGRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYD-ESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEEC--VAVPWQRGDVLLIDNWAVLHSRRPFDPP-RRVLASLCK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96894 for 2006 contacts (-48.3/contact) +
2D Compatibility (PS) -27867 + (NN) -11312 + (LL) 1300
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -142473.0 ( -71.02 by residue)
QMean score : 0.302
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