Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MIKIKRGLDLPISG---APEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGD-RVKLGQVL-----FTDKKNPSVSYTAPGA--GVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQV-RDNLLQSGLWTALRTRPFSKVPDPESSPSSIFVTAI------DTQPLAAD--PQVVIAEQGEAFQAGLTVLGRLARVFLCKAEGVSL--PGEALSGVTAQAFSGPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGK----LFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAAGQLQPGNNRLISGSVLGGR------TAHGAYAYLGRYHLQLSCLKEGDQREFLHYLRAGVEKHSLLNVF----VSRLLGGKRFAFTTSTNGSP-----RAM----------VPVGNYEAVMPLD---ILPTQLLRYLIVGDTEMAQKLGALELD--EEDLALCSYVCAGKYEYGPILRDNLARIEQEG-- |
| 4PQG Chain:A ((6-511)) | HHHMTIYNINLGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFDDNQVIWLYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDENKDLVQHAEYVFKGNLIRKDYFSY--TRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMNQGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVVVHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKYTQHQPKIVTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSGGEDSLLREIIANHQAEDYIQLKGHAELSQIYSQYEVYLTASTSEGFGLTLMEAIGSGLPLIGFDVPYGNQTFIEDGQNGYLIPSSSDHVEDQIKQAYAAKICQLYQENRLEAMRAYSYQIAEGFLTKEILEKWKKTVEEVLHD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110314 for 3208 contacts (-34.4/contact) +
2D Compatibility (PS) -46470 + (NN) -5945 + (LL) 276
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -180053.0 ( -56.13 by residue)
QMean score : 0.145
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