Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYG----SLRIAGLYRVRYDRTPE---PQPLATLGEMPALDAD-----DLLVRTCLERGELVSVRQELLER--GEQRAHSALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQS---DRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERG------------YYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKL-----RDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAI----------AGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNN--MEYLDVVDKAFECCESPRFT--DVNVQHIARLLTELGNLRRALKFA------------KEIQNIHKRSEALKAIALELVRRKKFEEVKKIIES-----------------------IP-------------------------------DPKIREEALNEIGTIE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174575 for 2622 contacts (-66.6/contact) +
2D Compatibility (PS) -37429 + (NN) -22062 + (LL) 10084
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -234932.0 ( -89.60 by residue)
QMean score : 0.379
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