Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTV-RFTDVQFYETADPDLAIGEFHGDGVATVSGGK---LAQDYISVLRTRDGQILLYRDFWNPLRHLEALGGVEAAAKIVQGA
3FF0 Chain:A ((20-155))
-KNRETVVKYMNTKG-QDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQ-------
General information:
TITO was launched using:
RESULT:
Template:
3FF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47653 for 891 contacts (-53.5/contact) +
2D Compatibility (PS) -14273 + (NN) -7909 + (LL) 824
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -73911.0 ( -82.95 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3FF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FF0-query.scw
PDB file :
Tito_Scwrl_3FF0.pdb
: