Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGV--GGR--PIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYG-ERVVFIGSD-YIYPRESNHVMRHLYRQHGGTVLEEIYIPLY--PSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTT-SEAEVAKMESDVAEGQVV-VAPYF-SS--IDTAASRAFVQACHGFFPENA-TITAWAEAAYWQTLLLGRAAQAAGSW-----RVEDVQRHLYDICID--APQG-PVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3EAF Chain:A ((2-378)) | ----SLTINVGLLVDETGPTSDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIKRDYAYNPTTAEEYYREFRDRYGVIAIIG-WGTADTEKLSDQVDTDKITYISASYSAKLLVKPFNFYPAPDYSTQACSGLAFLASEFGQGKLALAYDSKVAYSRSPIGAIKKAAPSLGLQVVGDYDLPLRATE--ADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLDA--FLLTNVWGFDERSPQLIGE-GGYGKVFGISPFIYPMFGQDVEGIQTIFEAARM-NGVSEDQINLRVVQGFVNVWLLIKAIESVTSQDLQERGGEALKEALEANTFDLGGITADTIDYEPGFHLAYRKVFIIKLGENGELQLMGKFEA---PSQVDCA---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182606 for 3238 contacts (-56.4/contact) +
2D Compatibility (PS) -38353 + (NN) -15152 + (LL) 528
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -249583.0 ( -77.08 by residue)
QMean score : 0.622
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