Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
2YAN Chain:A ((5-104))
-KLEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILRG-------
General information:
TITO was launched using:
RESULT:
Template:
2YAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72563 for 736 contacts (-98.6/contact) +
2D Compatibility (PS) -11273 + (NN) -6549 + (LL) 912
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -101473.0 ( -137.87 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2YAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YAN-query.scw
PDB file :
Tito_Scwrl_2YAN.pdb
: