Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHA---VCLEMLTRLARAAGSAGMVGGQAIDLGS----VGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
4LLS Chain:B ((35-311)) | --------VQAHFDKVLAAFEPLP------IVEAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVT----HPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDE--ITRLQQGKTGALIGWSAQAGA----RLAQADTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMSLIDEACDSLATYGAKADTLRETARFVVRRTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107453 for 2332 contacts (-46.1/contact) +
2D Compatibility (PS) -30388 + (NN) -28529 + (LL) 2652
1D Compatibility (HY) -17600 + (ID) 6450
Total energy: -187768.0 ( -80.52 by residue)
QMean score : 0.475
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