Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYLKAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSV-DSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMSVGKGMVAPFSTKEFDWQGNPKNMEAASVRYEVINDYGGRNTHDRALGK
2CO7 Chain:B ((8-218))
-----------------------ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADK-----SSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPE----TLDLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETG-N------KLKVENPTPFYMNLASVTVGGK---PITGLEYVPPFADKTLN---------HGDIEWRVITDFGGESHPFHY---
General information:
TITO was launched using:
RESULT:
Template:
2CO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86571 for 1368 contacts (-63.3/contact) +
2D Compatibility (PS) -20895 + (NN) -9967 + (LL) 3040
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -128843.0 ( -94.18 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_2CO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CO7-query.scw
PDB file :
Tito_Scwrl_2CO7.pdb
: