Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSTIH---PLPSFGLGTFRLT-GQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAI----AESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGNGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEIS--TNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGKVLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
| 3B3D Chain:C ((42-307)) | -KATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG---KYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAA---EIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQTYNKSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLR-VGP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132278 for 2114 contacts (-62.6/contact) +
2D Compatibility (PS) -28185 + (NN) -14259 + (LL) 404
1D Compatibility (HY) -21600 + (ID) 5400
Total energy: -201318.0 ( -95.23 by residue)
QMean score : 0.593
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