Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAGPAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASKEEAEAAKKALEEAGAKVELK
2CP9 Chain:A ((9-38))
------------------------------------------------------------------SKELLMKLRRKTGYSFVNCKKALETCGGDL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14081 for 169 contacts (-83.3/contact) +
2D Compatibility (PS) -3198 + (NN) -1880 + (LL) 9128
1D Compatibility (HY) -800 + (ID) 250
Total energy: -11081.0 ( -65.57 by residue)
QMean score : 0.883
(partial model without unconserved sides chains):
PDB file :
Tito_2CP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CP9-query.scw
PDB file :
Tito_Scwrl_2CP9.pdb
: