Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPY-CLDAEGRPLILISRIAQHTHNLQADPRCSML-V--GERGAEDIQAVGRLTLLAEARQLA-EEEVAAAAERYYRYF--PESADYHRV-HDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG |
| 3GAS Chain:A ((2-249)) | LNRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGYNNNQTLRIEFNHEVKDPKDYKNATIELCQSVEKTHDLKGVEEEVKAFKEGFDSVCLATLHP--NGHVVCSYAPLMSDG--KQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILGD------------KIAYVGDKGNPHNFAH--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77489 for 1038 contacts (-74.7/contact) +
2D Compatibility (PS) -17177 + (NN) -6506 + (LL) 5680
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -98992.0 ( -95.37 by residue)
QMean score : 0.221
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