Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
3ILO Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLAIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
3ILO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104941 for 1169 contacts (-89.8/contact) +
2D Compatibility (PS) -16056 + (NN) -9422 + (LL) 832
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -150287.0 ( -128.56 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3ILO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILO-query.scw
PDB file :
Tito_Scwrl_3ILO.pdb
: