Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYTLGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAALAGLAPPVLELAR---QFCAGRADLSPNPQADLAPRL------QEVLRGFGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKL--EVGSQSELFALFIECLSQGQRVGP |
| 3C3W Chain:A ((109-204)) | ---------------------------------------------------------------------------------------------------------------------------MELARAVKDVGAGRSLLDNRAAAALMAKLRGAAEKQDPLSG-----LTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFA-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13619 for 462 contacts (-29.5/contact) +
2D Compatibility (PS) -9080 + (NN) -1384 + (LL) 9360
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -21623.0 ( -46.80 by residue)
QMean score : 0.584
|
|
|