Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQ--CGIRAQYIVAVTFTNKAAREMKERVGTLLRGG---------------EGKGLTVSTFHNLGLNIIRKEHERLGYKPGFSIFDESDIKALLTDIMQKEYS----G----------DDG-------V---------------------DEIK--------------------------------NYI-GAW---KNDL-------------------------------ILP------EEALE----KAR-------------------------NPKEQTAAIVYLHYQRTLRAYNAVDFDDLILQPVKLFQEH-----PDVLQKWQNKVRYMLVDEYQDTNASQYLLVKLLVKD---RAQFTVVGDDDQSIYAWRGARPENLMQLKEDFP-----SLKVVMLEQNYRSTSRILKCANVLIANNPHVFEK----------QLWSEMG--HGDPIRVI---RCRNEDAEAERIAMEILTLHLR---------TERPYSEFAILYRGNHQAKLMELKLQHHQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVPRREIGSATLEKLGNYATQRKISMYAACDEMGLAEHLDSRFHERLQRFKRWMDGIRRQCAENEPIAVLRSMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLRDMLERQQE-EEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSS-----------------------------------IEADTVEEERRLAYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLEWEGMEDAPQEVKAAKGNAALADIRAMLKR |
| 3U4Q Chain:A ((10-936)) | --TWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRLLVVTFTNASAAEMKHRIAEALEKELVQRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKYYYLIDLDPGFRIADQTEGELIGDEVLDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELT----DNFLDDLAQIDELIQHQDDFSELYKRVPAVS-DPALLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDREPSEAARFYQEQFHEVLVDEYQDTNLVQESILQLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNKNFRSRADILDSTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLID-LETVQFEAKAIAKEIRKLISSPFKVYKKTHRNIQYRDIVILLRSMPWAPQIMEELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSLIRLENK--KAPYYEAMKDYLAAGDRSDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRDTKYMDYVGGM----PGGKQRQANLRVLYDRARQYEST-------AFRGLFRFLRFIERMQERGD---QEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKD----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228589 for 4443 contacts (-51.4/contact) +
2D Compatibility (PS) -64962 + (NN) -38656 + (LL) 4732
1D Compatibility (HY) -29200 + (ID) 6750
Total energy: -363425.0 ( -81.80 by residue)
QMean score : 0.504
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