Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVEMLPTAILLVLAVSVVAKDNATCDGPCGLRFRQNPQGGVRIVGGKAAQHGAWPWMVSLQIFTYNSHRYHTCGGSLLNSRWVLTAAHCFVGKNNVHDWRLVFGAKEITYGNNKPVKAPLQERYVEKIIIHEKYNSATEGNDIALVEITPPISCGRFIGPGCLPHFKA---GLPRGSQSCWVAGWGYIEEKAPRPSSILMEARVDLIDLDLCNSTQWYNG-----RVQPTNVCAGYPVGKIDTCQGDSGGPLMCKDSKESAYVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEVLKGKTYSDGKNHYDMETTELPELTSTS |
4JZE Chain:H ((1-243)) | ------------------------------------------IVGGKVCPKGECPWQVLLLV-----NGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHD-----GDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFV-RFSLVSGWGQLLDRGA-TALELMVLNVPRLMTQDCLQQ--SRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYR--GTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEP-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183763 for 1964 contacts (-93.6/contact) +
2D Compatibility (PS) -25632 + (NN) -11686 + (LL) 4316
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -235815.0 ( -120.07 by residue)
QMean score : 0.246
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