Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVMNSLRVILQASPGKLLWRKFQIPRFMPARPCSLYTCTYKTRNRALHPLWESVDLVPGGDRQSPINIRWRDSVYDPGLKPLTIS-YDPA--TCLHVWNNGYSFLVEFEDSTDKSVIKGGPLEHNYRLKQFHFHWGAID-AWGSEHTVDSKCFPAELHLVHWNAVRFENFEDAALEENGLAVIGVFLKLGKH-HKELQKLVDTLPSIKHKDALVEFGSFDPSCLMPTC-PDYWTYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRTVRSSFRHDYVLNVQAKPKPATSQATP |
4LU3 Chain:A ((21-282)) | -------------------------------------HWTYEGPHGQDH--WPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST---LYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109298 for 2047 contacts (-53.4/contact) +
2D Compatibility (PS) -27565 + (NN) -14152 + (LL) 4120
1D Compatibility (HY) -14800 + (ID) 4250
Total energy: -165945.0 ( -81.07 by residue)
QMean score : 0.355
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